ChatCell
C
Chatcell
Overview :
ChatCell is an application framework that makes single-cell analysis easier and more intuitive by leveraging natural language processing. It first transforms single-cell RNA sequencing data into a format easily understandable by large language models (LLMs). It then uses templates to integrate this single-cell language with task descriptions and target results, creating comprehensive single-cell instructions. To enhance the LLM's expertise in the single-cell domain, it undergoes vocabulary adaptation using a specialized single-cell vocabulary library to expand the model's knowledge base. Subsequently, it utilizes unified sequence generation to empower the model to proficiently execute various single-cell tasks.
Target Users :
Can be used to generate random single-cell sentences, pseudo-cells of different cell types, annotate cell types for single cells, and predict drug sensitivities of different cells.
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Features
Random cell sentence generation
Pseudo-cell generation
Cell type annotation
Drug sensitivity prediction
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